Basic units:
- Institute of American Studies and Polish Diaspora (English version),
- Institute of the Middle and Far East(English version),
- Institute of European Studies(English version),
- Institute of Political Science and International Relations (English version),
- Institute of Russian and East European Studies (Polish version only),
- Institute of Intercultural Studies (English version),
- Division of Ukrainian Studies (Polish version only),
- Centre for Holocaust Studies(English version),
- Centre for Chinese Language and Culture ("Confucius Institute in Krakow") (English version),
- Centre for Lithuanian Studies (Polish version only).
- King Sejong Institute
- Centre for International Studies and Development JU
Interfacultative units
- Centre for Quantitative Research in Political Science (English version),
- Jagiellonian Centre for Migration Studies (Polish version only)
Other units
- Jagiellonian University Polish Research Centre in London (English version).